SEJ29299.1 protein (Azotobacter beijerinckii)

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Known Interactions

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Predicted Interactions

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gene fusions

gene co-occurrence

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protein homology

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Score

SEJ29299.1

Hopanoid biosynthesis associated radical SAM protein HpnJ. (475 aa)

Predicted Functional Partners:

SEJ29265.1

0.962

SEJ29319.1

0.959

SEJ29337.1

0.951

SEJ38903.1

0.925

SEJ29344.1

0.921

SEJ29238.1

0.849

SEJ29230.1

0.821

SEJ29358.1

0.810

SEJ29386.1

0.796

SEJ29415.1

0.764

Your Current Organism:

Azotobacter beijerinckii

NCBI taxonomy Id: 170623
Other names: A. beijerinckii, ATCC 19360, CIP 106282, DSM 378, JCM 20742, NCAIM B.01800, NRRL B-14367, NRRL B-14640

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SEJ29230.1	SEJ29238.1	SAMN04244579_03809	SAMN04244579_03810	Hopene-associated glycosyltransferase HpnB.	Hopanoid biosynthesis associated radical SAM protein HpnH.	0.954
SEJ29230.1	SEJ29265.1	SAMN04244579_03809	SAMN04244579_03812	Hopene-associated glycosyltransferase HpnB.	Ceramide glucosyltransferase.	0.826
SEJ29230.1	SEJ29299.1	SAMN04244579_03809	SAMN04244579_03813	Hopene-associated glycosyltransferase HpnB.	Hopanoid biosynthesis associated radical SAM protein HpnJ.	0.821
SEJ29230.1	SEJ29319.1	SAMN04244579_03809	SAMN04244579_03814	Hopene-associated glycosyltransferase HpnB.	Hopanoid biosynthesis associated protein HpnK.	0.784
SEJ29230.1	SEJ29337.1	SAMN04244579_03809	SAMN04244579_03815	Hopene-associated glycosyltransferase HpnB.	Putative membrane protein.	0.830
SEJ29230.1	SEJ29344.1	SAMN04244579_03809	SAMN04244579_03816	Hopene-associated glycosyltransferase HpnB.	Hypothetical protein.	0.760
SEJ29230.1	SEJ29358.1	SAMN04244579_03809	SAMN04244579_03817	Hopene-associated glycosyltransferase HpnB.	Dihydroflavonol-4-reductase.	0.814
SEJ29230.1	SEJ29386.1	SAMN04244579_03809	SAMN04244579_03819	Hopene-associated glycosyltransferase HpnB.	Squalene-hopene/tetraprenyl-beta-curcumene cyclase.	0.794
SEJ29230.1	SEJ29415.1	SAMN04244579_03809	SAMN04244579_03821	Hopene-associated glycosyltransferase HpnB.	Hypothetical protein.	0.801
SEJ29238.1	SEJ29230.1	SAMN04244579_03810	SAMN04244579_03809	Hopanoid biosynthesis associated radical SAM protein HpnH.	Hopene-associated glycosyltransferase HpnB.	0.954
SEJ29238.1	SEJ29265.1	SAMN04244579_03810	SAMN04244579_03812	Hopanoid biosynthesis associated radical SAM protein HpnH.	Ceramide glucosyltransferase.	0.826
SEJ29238.1	SEJ29299.1	SAMN04244579_03810	SAMN04244579_03813	Hopanoid biosynthesis associated radical SAM protein HpnH.	Hopanoid biosynthesis associated radical SAM protein HpnJ.	0.849
SEJ29238.1	SEJ29319.1	SAMN04244579_03810	SAMN04244579_03814	Hopanoid biosynthesis associated radical SAM protein HpnH.	Hopanoid biosynthesis associated protein HpnK.	0.751
SEJ29238.1	SEJ29337.1	SAMN04244579_03810	SAMN04244579_03815	Hopanoid biosynthesis associated radical SAM protein HpnH.	Putative membrane protein.	0.819
SEJ29238.1	SEJ29344.1	SAMN04244579_03810	SAMN04244579_03816	Hopanoid biosynthesis associated radical SAM protein HpnH.	Hypothetical protein.	0.705
SEJ29238.1	SEJ29358.1	SAMN04244579_03810	SAMN04244579_03817	Hopanoid biosynthesis associated radical SAM protein HpnH.	Dihydroflavonol-4-reductase.	0.776
SEJ29238.1	SEJ29386.1	SAMN04244579_03810	SAMN04244579_03819	Hopanoid biosynthesis associated radical SAM protein HpnH.	Squalene-hopene/tetraprenyl-beta-curcumene cyclase.	0.925
SEJ29238.1	SEJ29415.1	SAMN04244579_03810	SAMN04244579_03821	Hopanoid biosynthesis associated radical SAM protein HpnH.	Hypothetical protein.	0.802
SEJ29265.1	SEJ29230.1	SAMN04244579_03812	SAMN04244579_03809	Ceramide glucosyltransferase.	Hopene-associated glycosyltransferase HpnB.	0.826
SEJ29265.1	SEJ29238.1	SAMN04244579_03812	SAMN04244579_03810	Ceramide glucosyltransferase.	Hopanoid biosynthesis associated radical SAM protein HpnH.	0.826

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Network Stats

number of nodes:

11

number of edges:

50

average node degree:

9.09

avg. local clustering coefficient:

0.934

expected number of edges:

35

PPI enrichment p-value:

0.00985

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0006071

Glycerol metabolic process

4 of 12

2.23

2.4

2.07e-05

GO:0006072

glycerol-3-phosphate metabolic process

3 of 4

2.58

2.24

6.99e-05

GO:0009401

Phosphoenolpyruvate-dependent sugar phosphotransferase system

3 of 8

2.28

1.95

0.00019

GO:0046168

glycerol-3-phosphate catabolic process

2 of 2

2.7

1.52

0.0017

GO:0006796

Phosphate-containing compound metabolic process

8 of 476

0.93

0.87

0.00011

(more ...)

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0016901

Oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor

3 of 3

2.7

2.23

8.05e-05

GO:0016614

Oxidoreductase activity, acting on CH-OH group of donors

5 of 63

1.6

1.71

8.05e-05

GO:0004368

glycerol-3-phosphate dehydrogenase (quinone) activity

2 of 2

2.7

1.24

0.0056

GO:0004371

Glycerone kinase activity

2 of 3

2.53

1.18

0.0070

GO:0016301

Kinase activity

5 of 256

0.99

0.65

0.0126

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0009331

glycerol-3-phosphate dehydrogenase complex

3 of 3

2.7

2.58

1.68e-05

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:3803

glycerol-3-phosphate metabolic process, and Glycerone kinase activity

7 of 8

2.65

6.67

7.88e-14

CL:2581

Phosphotransferase system

2 of 5

2.31

0.99

0.0152

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map00564

Glycerophospholipid metabolism

4 of 41

1.69

0.00016

map02060

Phosphotransferase system (PTS)

2 of 6

2.23

1.22

0.0051

map00561

Glycerolipid metabolism

3 of 41

1.57

1.06

0.0051

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0009331

glycerol-3-phosphate dehydrogenase complex

3 of 3

2.7

2.41

3.60e-05

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0762

Sugar transport

2 of 5

2.31

1.13

0.0080

KW-0598

Phosphotransferase system

2 of 5

2.31

1.13

0.0080

KW-0418

Kinase

6 of 253

1.08

0.94

0.00078

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF16901

C-terminal domain of alpha-glycerophosphate oxidase

2 of 2

2.7

1.01

0.0150

PF02896

PEP-utilising enzyme, PEP-binding domain

2 of 2

2.7

1.01

0.0150

PF00391

PEP-utilising enzyme, mobile domain

2 of 3

2.53

1.0

0.0150

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