STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ36752.1Transcriptional regulator, contains Arc/MetJ-type RHH (ribbon-helix-helix) DNA-binding domain. (138 aa)    
Predicted Functional Partners:
SEJ02442.1
Rho termination factor, N-terminal domain.
  
 
 0.992
SEJ36734.1
Esterase, PHB depolymerase family.
 
     0.932
SEI85576.1
mRNA interferase ChpB.
   
 
 0.842
SEI55383.1
Esterase, PHB depolymerase family.
 
     0.781
SEJ37381.1
DNA-binding transcriptional regulator, GntR family.
   
    0.538
SEI40143.1
NAD-dependent protein deacetylase, SIR2 family.
   
    0.518
cobB-2
NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily.
   
    0.518
SEI70975.1
NAD-dependent deacetylase.
   
    0.518
SEJ36774.1
DegP2 peptidase. Serine peptidase. MEROPS family S01B.
       0.476
SEJ37085.1
3',5'-cyclic AMP phosphodiesterase CpdA.
  
     0.449
Your Current Organism:
Azotobacter beijerinckii
NCBI taxonomy Id: 170623
Other names: A. beijerinckii, ATCC 19360, CIP 106282, DSM 378, JCM 20742, NCAIM B.01800, NRRL B-14367, NRRL B-14640
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.