STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ38200.1MFS transporter, AAHS family, cis,cis-muconate transporter. (425 aa)    
Predicted Functional Partners:
SEJ21249.1
Major Facilitator Superfamily protein.
  
     0.735
SEJ38164.1
Transcriptional regulator, IclR family.
 
   
 0.606
SEJ38179.1
acyl-CoA dehydrogenase.
 
     0.554
SEI43101.1
Homoserine dehydrogenase.
   
  0.542
SEI40726.1
Malonyl CoA-acyl carrier protein transacylase.
    
 0.527
SEI92982.1
Acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase.
 
  
 0.504
SEI48274.1
MFS transporter, MHS family, metabolite:H+ symporter.
  
     0.472
SEI68447.1
Chorismate mutase /prephenate dehydratase.
   
 
 0.470
SEI60584.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.465
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
  
  
  0.424
Your Current Organism:
Azotobacter beijerinckii
NCBI taxonomy Id: 170623
Other names: A. beijerinckii, ATCC 19360, CIP 106282, DSM 378, JCM 20742, NCAIM B.01800, NRRL B-14367, NRRL B-14640
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.