STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUU31420.1Transcriptional regulator, TetR family. (226 aa)    
Predicted Functional Partners:
CUU31421.1
Transcriptional regulator, GntR family domain / Aspartate aminotransferase.
 
     0.800
CUU31419.1
Hypothetical protein.
       0.636
CUU31426.1
Dihydropyrimidine dehydrogenase [NADP+].
 
   
 0.613
CUU31425.1
Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism.
 
     0.582
CUU31375.1
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
  
     0.572
CUU31423.1
Methylmalonate-semialdehyde dehydrogenase.
    
  0.556
CUU31428.1
Dihydropyrimidinase.
 
     0.542
CUU31422.1
Omega-amino acid--pyruvate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.511
CUU27037.1
DNA polymerase II.
  
     0.506
CUU31371.1
Uricase (urate oxidase).
  
     0.468
Your Current Organism:
Janthinobacterium sp. CG232
NCBI taxonomy Id: 1706231
Other names: J. sp. CG23_2, Janthinobacterium sp. CG23_2
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