STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUU28918.1Histone acetyltransferase HPA2 and related acetyltransferases. (112 aa)    
Predicted Functional Partners:
CUU31111.1
Hypothetical protein.
  
     0.770
CUU29732.1
Probable transmembrane protein.
  
     0.761
CUU30455.1
Histone acetyltransferase HPA2 and related acetyltransferases.
  
     0.760
CUU31824.1
Probable transmembrane protein.
  
     0.756
CUU28236.1
Putative transmembrane protein.
  
     0.754
CUU28287.1
DNA-binding protein H-NS.
  
     0.737
CUU28395.1
Probable signal peptide protein.
  
     0.722
CUU27964.1
DNA-binding protein H-NS.
  
     0.714
CUU28237.1
Probable transmembrane protein.
  
     0.713
CUU33478.1
Histone H1-like protein HC2.
  
     0.712
Your Current Organism:
Janthinobacterium sp. CG232
NCBI taxonomy Id: 1706231
Other names: J. sp. CG23_2, Janthinobacterium sp. CG23_2
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