STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN3177_927Transcriptional regulator. (377 aa)    
Predicted Functional Partners:
CUU29923.1
Glutamate synthase [NADPH] large chain.
    
 
 0.895
CUU31031.1
Peptide synthetase.
    
 
 0.884
CUU31067.1
Phosphocarrier protein, nitrogen regulation associated.
 
 
 
 0.842
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
    
   0.768
CUU27787.1
Isochorismatase of siderophore biosynthesis.
    
   0.762
pheT
Phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
    
   0.760
ribB-2
3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
   0.760
metG
Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
   0.745
CUU31936.1
Thioredoxin reductase.
    
 
 0.651
CUU32823.1
Fructose ABC transporter, substrate-binding component FrcB.
 
 
 0.545
Your Current Organism:
Janthinobacterium sp. CG232
NCBI taxonomy Id: 1706231
Other names: J. sp. CG23_2, Janthinobacterium sp. CG23_2
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