STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECHDC3LOW QUALITY PROTEIN: enoyl-CoA hydratase domain-containing protein 3, mitochondrial. (296 aa)    
Predicted Functional Partners:
PROSER2
Proline and serine-rich protein 2.
      
 0.669
IVD
isovaleryl-CoA dehydrogenase, mitochondrial.
     
 0.568
ACOXL
LOW QUALITY PROTEIN: acyl-coenzyme A oxidase-like protein.
     
 0.566
HIBCH
3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.547
PECR
Peroxisomal trans-2-enoyl-CoA reductase.
   
  
 0.547
NUDT5
ADP-sugar pyrophosphatase isoform X1.
      
 0.545
CENPV
Centromere protein V.
      
 0.543
SLC5A12
Sodium-coupled monocarboxylate transporter 2; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
      
 0.543
CCDC3
Coiled-coil domain-containing protein 3.
      
 0.542
GNPDA1
Glucosamine-6-phosphate isomerase.
      
 0.522
Your Current Organism:
Neophocaena asiaeorientalis
NCBI taxonomy Id: 1706337
Other names: N. asiaeorientalis asiaeorientalis, Neophocaena asiaeorientalis asiaeorientalis, Yangtze finless porpoise
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