STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPS1840S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (152 aa)    
Predicted Functional Partners:
RPS13
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
  
 0.999
RPL9
60S ribosomal protein L9.
  
 
 0.999
MRPL36
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.999
RPS14
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
  
 0.999
RPS29
40S ribosomal protein S29.
  
 0.999
LOC112393240
60S ribosomal protein L9-like.
  
 
 0.999
RPL4
60S ribosomal protein L4.
  
 0.999
RPL13
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 
 0.999
RPS23
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 0.999
TSFM
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
  
  
 0.999
Your Current Organism:
Neophocaena asiaeorientalis
NCBI taxonomy Id: 1706337
Other names: N. asiaeorientalis asiaeorientalis, Neophocaena asiaeorientalis asiaeorientalis, Yangtze finless porpoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.