STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKUB1Protein ANKUB1. (542 aa)    
Predicted Functional Partners:
TCTEX1D1
Tctex1 domain-containing protein 1.
      
 0.544
TMEM255A
Transmembrane protein 255A isoform X2.
      
 0.544
LRRC71
Leucine-rich repeat-containing protein 71 isoform X1.
      
 0.544
ANKRD66
Ankyrin repeat domain-containing protein 66.
      
 0.544
FAM216B
Protein FAM216B.
      
 0.532
MAP3K19
LOW QUALITY PROTEIN: mitogen-activated protein kinase kinase kinase 19.
   
  
 0.525
DAW1
Dynein assembly factor with WDR repeat domains 1.
      
 0.523
PPP1R17
Protein phosphatase 1 regulatory subunit 17.
      
 0.518
CCDC114
Coiled-coil domain-containing protein 114 isoform X1.
      
 0.513
PARVG
Gamma-parvin isoform X1.
      
 0.499
Your Current Organism:
Neophocaena asiaeorientalis
NCBI taxonomy Id: 1706337
Other names: N. asiaeorientalis asiaeorientalis, Neophocaena asiaeorientalis asiaeorientalis, Yangtze finless porpoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.