STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJY89963.1Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)    
Predicted Functional Partners:
KJY86573.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.929
KJY93865.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.928
KJY88854.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.920
KJY91006.1
Histidine kinase; Part of the two-component regulatory system with UvrY; involved in the regulation of carbon metabolism via the csrA/csrB regulatory system; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.899
KJY88877.1
c-di-GMP phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.888
KJY93179.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.884
KJY92966.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.884
KJY93124.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.882
KJY94222.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.880
KJY88855.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.878
Your Current Organism:
Vibrio neptunius
NCBI taxonomy Id: 170651
Other names: CAIM 532, LMG 20536, LMG:20536, V. neptunius, Vibrio neptunianum, Vibrio neptunius Thompson et al. 2003, Vibrio sp. LMG 20536
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.