STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001553785_05287Unannotated protein. (307 aa)    
Predicted Functional Partners:
GCA_001553785_05291
Unannotated protein.
  
 0.931
GCA_001553785_04237
Unannotated protein.
 
  
 0.883
GCA_001553785_05286
Unannotated protein.
       0.865
GCA_001553785_05283
Unannotated protein.
 
  
 0.812
GCA_001553785_05285
Unannotated protein.
       0.786
GCA_001553785_01567
Unannotated protein.
 
  
 0.708
GCA_001553785_00939
Unannotated protein.
 
   
 0.681
GCA_001553785_06052
Unannotated protein.
     
 0.664
GCA_001553785_05288
Unannotated protein.
   
   0.656
GCA_001553785_06051
Unannotated protein.
     
 0.641
Your Current Organism:
Actinoplanes sp. TFC3
NCBI taxonomy Id: 1710355
Other names: A. sp. TFC3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.