STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001553785_07182Unannotated protein. (442 aa)    
Predicted Functional Partners:
GCA_001553785_02582
Unannotated protein.
   
 
 0.608
GCA_001553785_02580
Unannotated protein.
   
 
 0.557
GCA_001553785_02581
Unannotated protein.
   
 
 0.553
GCA_001553785_07183
Unannotated protein.
 
     0.551
GCA_001553785_07184
Unannotated protein.
 
     0.533
GCA_001553785_07187
Unannotated protein.
 
     0.489
GCA_001553785_00132
Unannotated protein.
  
  
 0.443
GCA_001553785_04787
Unannotated protein.
   
 
 0.412
GCA_001553785_04070
Unannotated protein.
    
  0.410
Your Current Organism:
Actinoplanes sp. TFC3
NCBI taxonomy Id: 1710355
Other names: A. sp. TFC3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.