STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ONI42980.1Pyruvate formate-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (760 aa)    
Predicted Functional Partners:
ONI42046.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.979
ONI42885.1
Glycyl-radical enzyme activating protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.964
ONI42831.1
Glycyl radical-activating protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.938
ONI42982.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.930
ONI37567.1
Glycyl-radical activating family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.928
ONI42106.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.924
ONI42542.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.846
ONI42543.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.846
ONI42544.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.846
ONI42545.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.846
Your Current Organism:
Epulopiscium sp. SCGB11WGAEpuloA1
NCBI taxonomy Id: 1710701
Other names: E. sp. SCG-B11WGA-EpuloA1, Epulopiscium sp. SCG-B11WGA-EpuloA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.