Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTS-EII | PTS-EII-19 | spr0063 | spr1967 | Phosphotransferase system sugar-specific EII component. | Phosphotransferase system sugar-specific EII component. | 0.986 |
PTS-EII | PTS-EII-20 | spr0063 | spr1968 | Phosphotransferase system sugar-specific EII component. | Phosphotransferase system sugar-specific EII component. | 0.985 |
PTS-EII | PTS-EII-22 | spr0063 | spr1970 | Phosphotransferase system sugar-specific EII component. | Phosphotransferase system sugar-specific EII component. | 0.925 |
PTS-EII | PTS-EII-7 | spr0063 | spr0294 | Phosphotransferase system sugar-specific EII component. | Phosphotransferase system sugar-specific EII component. | 0.693 |
PTS-EII | PTS-EII-8 | spr0063 | spr0295 | Phosphotransferase system sugar-specific EII component. | Phosphotransferase system sugar-specific EII component. | 0.801 |
PTS-EII | PTS-EIIB | spr0063 | spr0060 | Phosphotransferase system sugar-specific EII component. | Phosphotransferase system sugar-specific EIIB component. | 0.962 |
PTS-EII | PTS-EIIC | spr0063 | spr0061 | Phosphotransferase system sugar-specific EII component. | Phosphotransferase system sugar-specific EIIC component. | 0.995 |
PTS-EII | PTS-EIID | spr0063 | spr0062 | Phosphotransferase system sugar-specific EII component. | Phosphotransferase system sugar-specific EIID component. | 0.997 |
PTS-EII | manN | spr0063 | spr0259 | Phosphotransferase system sugar-specific EII component. | Phosphotransferase system, mannose-specific EIID. | 0.982 |
PTS-EII-19 | PTS-EII | spr1967 | spr0063 | Phosphotransferase system sugar-specific EII component. | Phosphotransferase system sugar-specific EII component. | 0.986 |
PTS-EII-19 | PTS-EII-20 | spr1967 | spr1968 | Phosphotransferase system sugar-specific EII component. | Phosphotransferase system sugar-specific EII component. | 0.999 |
PTS-EII-19 | PTS-EII-22 | spr1967 | spr1970 | Phosphotransferase system sugar-specific EII component. | Phosphotransferase system sugar-specific EII component. | 0.997 |
PTS-EII-19 | PTS-EII-5 | spr1967 | spr0291 | Phosphotransferase system sugar-specific EII component. | Phosphotransferase system sugar-specific EII component. | 0.897 |
PTS-EII-19 | PTS-EII-7 | spr1967 | spr0294 | Phosphotransferase system sugar-specific EII component. | Phosphotransferase system sugar-specific EII component. | 0.906 |
PTS-EII-19 | PTS-EIIB | spr1967 | spr0060 | Phosphotransferase system sugar-specific EII component. | Phosphotransferase system sugar-specific EIIB component. | 0.897 |
PTS-EII-19 | PTS-EIIC | spr1967 | spr0061 | Phosphotransferase system sugar-specific EII component. | Phosphotransferase system sugar-specific EIIC component. | 0.988 |
PTS-EII-19 | PTS-EIID | spr1967 | spr0062 | Phosphotransferase system sugar-specific EII component. | Phosphotransferase system sugar-specific EIID component. | 0.917 |
PTS-EII-19 | manN | spr1967 | spr0259 | Phosphotransferase system sugar-specific EII component. | Phosphotransferase system, mannose-specific EIID. | 0.911 |
PTS-EII-20 | PTS-EII | spr1968 | spr0063 | Phosphotransferase system sugar-specific EII component. | Phosphotransferase system sugar-specific EII component. | 0.985 |
PTS-EII-20 | PTS-EII-19 | spr1968 | spr1967 | Phosphotransferase system sugar-specific EII component. | Phosphotransferase system sugar-specific EII component. | 0.999 |
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