trkA protein (Streptococcus pneumoniae) - STRING interaction network

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Score

trkA

Trk transporter NAD+ binding protein - K+ transport. (228 aa)

Predicted Functional Partners:

trkH

0.997

fer

0.887

spr0069

0.773

trkH-2

0.671

mscL

0.643

basA

0.609

sunL

0.534

lplA

0.527

greA

0.485

cutC

0.416

Your Current Organism:

Streptococcus pneumoniae

NCBI taxonomy Id: 171101
Other names: S. pneumoniae R6, Streptococcus pneumoniae (strain ATCC BAA-255 / R6), Streptococcus pneumoniae R6, Streptococcus pneumoniae str. R6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
basA	fer	spr0285	spr1458	Gluthatione peroxidase; Belongs to the glutathione peroxidase family.	Ferredoxin.	0.884
basA	trkA	spr0285	spr0071	Gluthatione peroxidase; Belongs to the glutathione peroxidase family.	Trk transporter NAD+ binding protein - K+ transport.	0.609
cutC	trkA	spr1139	spr0071	Copper sensitivity; Participates in the control of copper homeostasis. Belongs to the CutC family.	Trk transporter NAD+ binding protein - K+ transport.	0.416
fer	basA	spr1458	spr0285	Ferredoxin.	Gluthatione peroxidase; Belongs to the glutathione peroxidase family.	0.884
fer	greA	spr1458	spr1369	Ferredoxin.	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	0.626
fer	trkA	spr1458	spr0071	Ferredoxin.	Trk transporter NAD+ binding protein - K+ transport.	0.887
greA	fer	spr1369	spr1458	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	Ferredoxin.	0.626
greA	sunL	spr1369	spr1579	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	rRNA methylase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	0.408
greA	trkA	spr1369	spr0071	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	Trk transporter NAD+ binding protein - K+ transport.	0.485
lplA	trkA	spr1047	spr0071	Lipoate protein ligase A.	Trk transporter NAD+ binding protein - K+ transport.	0.527
mscL	trkA	spr0915	spr0071	Large conductance mechano-sensitive ion channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.	Trk transporter NAD+ binding protein - K+ transport.	0.643
spr0069	trkA	spr0069	spr0071	Hypothetical protein.	Trk transporter NAD+ binding protein - K+ transport.	0.773
spr0069	trkH	spr0069	spr0070	Hypothetical protein.	Trk transporter membrane-spanning protein - K+ transport.	0.773
sunL	greA	spr1579	spr1369	rRNA methylase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	0.408
sunL	trkA	spr1579	spr0071	rRNA methylase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	Trk transporter NAD+ binding protein - K+ transport.	0.534
trkA	basA	spr0071	spr0285	Trk transporter NAD+ binding protein - K+ transport.	Gluthatione peroxidase; Belongs to the glutathione peroxidase family.	0.609
trkA	cutC	spr0071	spr1139	Trk transporter NAD+ binding protein - K+ transport.	Copper sensitivity; Participates in the control of copper homeostasis. Belongs to the CutC family.	0.416
trkA	fer	spr0071	spr1458	Trk transporter NAD+ binding protein - K+ transport.	Ferredoxin.	0.887
trkA	greA	spr0071	spr1369	Trk transporter NAD+ binding protein - K+ transport.	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	0.485
trkA	lplA	spr0071	spr1047	Trk transporter NAD+ binding protein - K+ transport.	Lipoate protein ligase A.	0.527

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