STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spr0136Glycosyl transferase, family 2. (317 aa)    
Predicted Functional Partners:
epsG
Glycosyltransferase involved exopolysaccharide (EPS) synthesis.
 
  
 0.991
spr0091
Conserved hypothetical protein; Putative sugar transferase related protein.
 
 
 0.919
spr1655
Conserved hypothetical protein; Putative glycosyltransferase.
 
  
 0.918
capD
CapD protein, required for the biosynthesis of type 1 capsular polysaccharide.
  
  
 0.874
spr1654
Conserved hypothetical protein; Putative role in biosynthesis of amino sugar; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.872
ABC-NP
ABC transporter ATP-binding/membrane spanning permease - possible multidrug resistance.
  
  
 0.770
spr1224
Conserved hypothetical protein; Similar to capsular polysaccharide biosynthsis protein.
 
  
 0.603
spr0072
Conserved hypothetical protein.
  
     0.600
galU
UTP-glucose-1-phosphate uridylyltransferase.
  
  
 0.560
spr0134
Degenerative transposase.
       0.416
Your Current Organism:
Streptococcus pneumoniae
NCBI taxonomy Id: 171101
Other names: S. pneumoniae R6, Streptococcus pneumoniae (strain ATCC BAA-255 / R6), Streptococcus pneumoniae R6, Streptococcus pneumoniae str. R6
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