Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
ABC-SBP-3ABC transporter substrate-binding protein - amino acid transport. (276 aa)    
Predicted Functional Partners:
ABC-MSP-13
ABC transporter membrane-spanning permease - aspartate/glutamate transport.
 0.989
ABC-NDB-2
ABC transporter ATP-binding protein - aspartate/glutamate transport.
 
 0.929
glnP-7
ABC transporter membrane-spanning permease - glutamine transport.
 
 
 0.823
glnP-5
ABC transporter membrane-spanning permease - glutamine transport.
 
 
 0.773
ABC-SBP-4
ABC transporter solute-binding protein - unknown substrate; Belongs to the nlpA lipoprotein family.
  
  
 0.690
glnQ-4
ABC transporter ATP-binding protein - glutamine transport.
 
 
 0.686
ABC-SBP-10
ABC transporter substrate-binding protein - sugar transport.
   
  
 0.686
glnP-2
ABC transporter membrane-spanning permease - glutamine transport.
 
 0.677
ABC-NBD-2
ABC transporter ATP-binding protein - unknown substrate; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
   
 0.627
glnP
ABC transporter membrane-spanning permease - glutamine transport.
 
 
 0.622
Your Current Organism:
Streptococcus pneumoniae
NCBI taxonomy Id: 171101
Other names: S. pneumoniae R6, Streptococcus pneumoniae (strain ATCC BAA-255 / R6), Streptococcus pneumoniae R6, Streptococcus pneumoniae str. R6
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