Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTS-EII-10 | PTS-EII-11 | spr0423 | spr0425 | Phosphotransferase system sugar-specific EII component. | Phosphotransferase system sugar-specific EII component. | 0.998 |
PTS-EII-10 | lacC | spr0423 | spr1074 | Phosphotransferase system sugar-specific EII component. | Tagatose-6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | 0.412 |
PTS-EII-10 | lacE | spr0423 | spr1070 | Phosphotransferase system sugar-specific EII component. | PTS system, lactose-specific IIBC component. | 0.995 |
PTS-EII-10 | lacF | spr0423 | spr1071 | Phosphotransferase system sugar-specific EII component. | PTS system, lactose-specific IIA component. | 0.905 |
PTS-EII-10 | lacG | spr0423 | spr0424 | Phosphotransferase system sugar-specific EII component. | Phospho-beta-D-galactosidase; Belongs to the glycosyl hydrolase 1 family. | 0.978 |
PTS-EII-10 | lacG-2 | spr0423 | spr1069 | Phosphotransferase system sugar-specific EII component. | Phospho-beta-D-galactosidase; Belongs to the glycosyl hydrolase 1 family. | 0.914 |
PTS-EII-11 | PTS-EII-10 | spr0425 | spr0423 | Phosphotransferase system sugar-specific EII component. | Phosphotransferase system sugar-specific EII component. | 0.998 |
PTS-EII-11 | lacA | spr0425 | spr1076 | Phosphotransferase system sugar-specific EII component. | Galactose-6-phosphate isomerase LacA subunit. | 0.554 |
PTS-EII-11 | lacB | spr0425 | spr1075 | Phosphotransferase system sugar-specific EII component. | Galactose-6-phosphate isomerase LacB subunit. | 0.661 |
PTS-EII-11 | lacC | spr0425 | spr1074 | Phosphotransferase system sugar-specific EII component. | Tagatose-6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | 0.761 |
PTS-EII-11 | lacD | spr0425 | spr1073 | Phosphotransferase system sugar-specific EII component. | Tagatose 1,6-diphosphate aldolase; Belongs to the aldolase LacD family. | 0.677 |
PTS-EII-11 | lacE | spr0425 | spr1070 | Phosphotransferase system sugar-specific EII component. | PTS system, lactose-specific IIBC component. | 0.947 |
PTS-EII-11 | lacF | spr0425 | spr1071 | Phosphotransferase system sugar-specific EII component. | PTS system, lactose-specific IIA component. | 0.995 |
PTS-EII-11 | lacG | spr0425 | spr0424 | Phosphotransferase system sugar-specific EII component. | Phospho-beta-D-galactosidase; Belongs to the glycosyl hydrolase 1 family. | 0.985 |
PTS-EII-11 | lacG-2 | spr0425 | spr1069 | Phosphotransferase system sugar-specific EII component. | Phospho-beta-D-galactosidase; Belongs to the glycosyl hydrolase 1 family. | 0.972 |
PTS-EII-11 | lacT | spr0425 | spr1072 | Phosphotransferase system sugar-specific EII component. | Antiterminator protein. | 0.540 |
lacA | PTS-EII-11 | spr1076 | spr0425 | Galactose-6-phosphate isomerase LacA subunit. | Phosphotransferase system sugar-specific EII component. | 0.554 |
lacA | lacB | spr1076 | spr1075 | Galactose-6-phosphate isomerase LacA subunit. | Galactose-6-phosphate isomerase LacB subunit. | 0.999 |
lacA | lacC | spr1076 | spr1074 | Galactose-6-phosphate isomerase LacA subunit. | Tagatose-6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | 0.998 |
lacA | lacD | spr1076 | spr1073 | Galactose-6-phosphate isomerase LacA subunit. | Tagatose 1,6-diphosphate aldolase; Belongs to the aldolase LacD family. | 0.961 |
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