Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
spr0747Conserved hypothetical protein; Similar to basic membrane protein A from Lactococcus lactis subsp. lactis. (374 aa)    
Predicted Functional Partners:
ABC-NBD-12
ABC transporter ATP-binding protein - ribose/galactose transport.
 
 
 0.995
ABC-MSP-8
ABC transporter membrane-spanning permease - ribose/galactose transport; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.994
ABC-MSP-7
ABC transporter membrane-spanning permease - ribose/galactose transport; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.993
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
  
  
 0.865
cdd
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
     
 0.852
pdp
Pyrimidine nucleoside phosphorylase.
     
 0.842
spr0743
Conserved hypothetical protein.
       0.784
whiA
Conserved hypothetical protein; Involved in cell division and chromosome segregation.
     
 0.596
coaA
Pantothenate kinase.
       0.534
rpsT
30S Ribosomal protein subunit S20; Binds directly to 16S ribosomal RNA.
       0.510
Your Current Organism:
Streptococcus pneumoniae
NCBI taxonomy Id: 171101
Other names: S. pneumoniae R6, Streptococcus pneumoniae (strain ATCC BAA-255 / R6), Streptococcus pneumoniae R6, Streptococcus pneumoniae str. R6
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