Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IS1167-3Transposase (orf1). (172 aa)    
Predicted Functional Partners:
spr0766
Degenerate transposase (orf2).
 
    0.859
IS1167
Transposase (orf2).
  
     0.774
spr0133
Degenerate transposase (orf2).
  
     0.774
spr1702
Degenerate transposase (orf2).
  
     0.774
spr0986
Degenerate transposase (orf2).
  
    0.773
spr1008
Degenerate transposase (orf2).
  
     0.773
spr1676
Degenerate transposase (orf2).
  
     0.773
spr0132
Degenerate transposase (orf2).
  
     0.772
spr0017
Degenerate transposase (orf2); SPR0017-0019 constitute an IS1167 element in which the orf1 and orf2 components are degenerate.
  
     0.736
bgaA
Beta-galactosidase precursor.
      
 0.498
Your Current Organism:
Streptococcus pneumoniae
NCBI taxonomy Id: 171101
Other names: S. pneumoniae R6, Streptococcus pneumoniae (strain ATCC BAA-255 / R6), Streptococcus pneumoniae R6, Streptococcus pneumoniae str. R6
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.