Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
spr0804Conserved hypothetical protein. (271 aa)    
Predicted Functional Partners:
spr0805
Conserved hypothetical protein.
 
  
 0.976
spr0809
Conserved hypothetical protein; Belongs to the SprT family.
 
     0.654
tex
Toxin expression - transcriptional accessory protein.
       0.529
spr0559
Conserved hypothetical protein.
  
     0.479
spr0895
Conserved hypothetical protein.
  
     0.465
spr0810
Hypothetical protein.
       0.461
spr1416
Hypothetical protein.
  
     0.461
spr1865
Conserved hypothetical protein; Putative DNA binding protein.
  
     0.448
spr0558
Conserved hypothetical protein.
  
     0.430
spr0008
Hypothetical protein.
  
     0.407
Your Current Organism:
Streptococcus pneumoniae
NCBI taxonomy Id: 171101
Other names: S. pneumoniae R6, Streptococcus pneumoniae (strain ATCC BAA-255 / R6), Streptococcus pneumoniae R6, Streptococcus pneumoniae str. R6
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