STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccrBLow similarity to site-specific recombinase. (559 aa)    
Predicted Functional Partners:
spr0493
Conserved hypothetical protein.
      
 0.949
vanZ
Teicoplanin resistance protein.
  
   
 0.869
spr0840
Hypothetical protein.
  
    0.768
spr0933
Hypothetical protein.
 
   
 0.745
spr0957
Tn5252, relaxase, truncation.
 
   
 0.612
spr0941
Hypothetical protein.
       0.561
spr0943
Hypothetical protein.
       0.433
spr0500
Hypothetical protein.
  
  
 0.427
Your Current Organism:
Streptococcus pneumoniae
NCBI taxonomy Id: 171101
Other names: S. pneumoniae R6, Streptococcus pneumoniae (strain ATCC BAA-255 / R6), Streptococcus pneumoniae R6, Streptococcus pneumoniae str. R6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.