STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spr1150Conserved hypothetical protein; Probable oligosaccharide repeat unit transporter. (495 aa)    
Predicted Functional Partners:
licD2
licD Protein; Required for phosphorylcholine incorporation in teichoic and lipoteichoic acids.
 
   
 0.841
licD1
Required for phosphorylcholine incorporation in teichoic and lipoteichoic acids.
 
   
 0.832
tarJ
Conserved hypothetical protein; Catalyzes the NADPH dependent reduction of D-ribulose 5- phosphate to D-ribitol 5-phosphate.
 
  
 0.803
licB
Homologous to LicB, which regulates expression of LPS epitopes in H. influenzae.
 
  
 0.786
spr1655
Conserved hypothetical protein; Putative glycosyltransferase.
 
  
 0.659
spr1654
Conserved hypothetical protein; Putative role in biosynthesis of amino sugar; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.647
licC
Homologous to LicC, which regulates expression of LPS epitopes in H. influenzae.
 
     0.643
spr1708
Hypothetical protein.
 
  
 0.639
cps2A
The type 2 capsule locus of Streptococcus pneumoniae.
 
  
 0.626
tarI
Conserved hypothetical protein; Catalyzes the transfer of the cytidylyl group of CTP to D- ribitol 5-phosphate.
 
  
 0.626
Your Current Organism:
Streptococcus pneumoniae
NCBI taxonomy Id: 171101
Other names: S. pneumoniae R6, Streptococcus pneumoniae (strain ATCC BAA-255 / R6), Streptococcus pneumoniae R6, Streptococcus pneumoniae str. R6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.