Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
adh2 | adhB | spr1963 | spr1670 | Probable alcohol dehydrogenase. | Alcohol dehydrogenase. | 0.879 |
adh2 | adhE | spr1963 | spr1837 | Probable alcohol dehydrogenase. | Alcohol-acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | 0.755 |
adh2 | fba | spr1963 | spr0530 | Probable alcohol dehydrogenase. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | 0.615 |
adh2 | gapN | spr1963 | spr1028 | Probable alcohol dehydrogenase. | NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.851 |
adh2 | nadC | spr1963 | spr1829 | Probable alcohol dehydrogenase. | Probable nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | 0.943 |
adhB | adh2 | spr1670 | spr1963 | Alcohol dehydrogenase. | Probable alcohol dehydrogenase. | 0.879 |
adhB | adhE | spr1670 | spr1837 | Alcohol dehydrogenase. | Alcohol-acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | 0.868 |
adhB | atpH | spr1670 | spr1363 | Alcohol dehydrogenase. | Proton-translocating ATPase, F1 sector, delta-subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.442 |
adhB | czcD | spr1670 | spr1672 | Alcohol dehydrogenase. | Cation diffusion facilitator transporter - heavy metal transport. | 0.921 |
adhB | fba | spr1670 | spr0530 | Alcohol dehydrogenase. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | 0.476 |
adhB | gapN | spr1670 | spr1028 | Alcohol dehydrogenase. | NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.671 |
adhB | ilvB | spr1670 | spr0401 | Alcohol dehydrogenase. | Acetolactate synthase large subunit. | 0.417 |
adhB | nadC | spr1670 | spr1829 | Alcohol dehydrogenase. | Probable nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | 0.868 |
adhB | phnA | spr1670 | spr1455 | Alcohol dehydrogenase. | Required for expression of the phosphonate utilization phenotype in E. coli. | 0.525 |
adhB | spr1671 | spr1670 | spr1671 | Alcohol dehydrogenase. | Conserved hypothetical protein; Similar to transcriptional regulator (MerR family). | 0.778 |
adhE | adh2 | spr1837 | spr1963 | Alcohol-acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | Probable alcohol dehydrogenase. | 0.755 |
adhE | adhB | spr1837 | spr1670 | Alcohol-acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | Alcohol dehydrogenase. | 0.868 |
adhE | fba | spr1837 | spr0530 | Alcohol-acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | 0.790 |
adhE | gapN | spr1837 | spr1028 | Alcohol-acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.659 |
adhE | ilvB | spr1837 | spr0401 | Alcohol-acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | Acetolactate synthase large subunit. | 0.519 |
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