Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fatBABC transporter substrate-binding protein - ferric iron transport. (321 aa)    
Predicted Functional Partners:
fatD
ABC transporter membrane-spanning permease - ferric iron transport; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.998
fatC
ABC transporter membrane-spanning permease - ferric iron transport; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.997
fecE
ABC transporter ATP-binding protein - ferric iron transport.
 
  
 0.997
ABC-NBD-15
ABC transporter ATP-binding protein - iron transport.
 
  
 0.679
amiC
ABC transporter membrane-spanning permease - oligopeptide transport; Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. OppBC subfamily.
      
 0.599
ABC-MSP-9
ABC transporter membrane-spanning permease - iron transport; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
  
 0.573
PTS-EII-13
Phosphotransferase system sugar-specific EII component.
      
 0.541
ABC-MSP-10
ABC transporter membrane-spanning permease - iron transport; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
    0.506
glnR
Transcriptional repressor of the glutamine synthetase gene.
      
 0.449
glnA
Glutamine synthetase type 1.
      
 0.402
Your Current Organism:
Streptococcus pneumoniae
NCBI taxonomy Id: 171101
Other names: S. pneumoniae R6, Streptococcus pneumoniae (strain ATCC BAA-255 / R6), Streptococcus pneumoniae R6, Streptococcus pneumoniae str. R6
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