STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJJ39787.1Cytochrome oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology. (327 aa)    
Predicted Functional Partners:
KJJ39773.1
Cytochrome C oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
KJJ39774.1
Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
KJJ40104.1
Protoheme IX farnesyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.995
KJJ39786.1
Cytochrome oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.988
KJJ39788.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.983
KJJ38690.1
ATP synthase F0 subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.976
KJJ38989.1
Cytochrome C oxidase subunit IV; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.972
KJJ38988.1
Cytochrome C oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.957
KJJ38923.1
Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.952
KJJ38990.1
Bifunctional cbb3-type cytochrome c oxidase subunit I/II; CcoN/CcoO FixN/FixO; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.926
Your Current Organism:
Aequorivita vladivostokensis
NCBI taxonomy Id: 171194
Other names: A. vladivostokensis, Aequorivita vladivostokensis (Nedashkovskaya et al. 2003) Hahnke et al. 2016, JCM 11732, KMM 3516, NBRC 16718, Vitellibacter vladivostokensis, Vitellibacter vladivostokensis Nedashkovskaya et al. 2003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.