STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJJ39212.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)    
Predicted Functional Partners:
KJJ39078.1
Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.820
KJJ39725.1
DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.647
KJJ39211.1
Lipoprotein ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.641
KJJ39213.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.503
KJJ39480.1
DNA mismatch repair protein MutL; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.471
KJJ38077.1
uracil-DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.447
KJJ37737.1
Acyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.447
KJJ37719.1
Adenine glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.437
KJJ39631.1
3'-5' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.435
KJJ37919.1
Tryptophan synthase alpha chain; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.428
Your Current Organism:
Aequorivita vladivostokensis
NCBI taxonomy Id: 171194
Other names: A. vladivostokensis, Aequorivita vladivostokensis (Nedashkovskaya et al. 2003) Hahnke et al. 2016, JCM 11732, KMM 3516, NBRC 16718, Vitellibacter vladivostokensis, Vitellibacter vladivostokensis Nedashkovskaya et al. 2003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.