STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJJ39228.1Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology. (428 aa)    
Predicted Functional Partners:
KJJ39229.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.849
KJJ38842.1
Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.664
KJJ37825.1
Ubiquinone biosynthesis protein UbiA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.600
KJJ39230.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.550
KJJ37413.1
Cell division protein ZapA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.498
KJJ38475.1
ATP-dependent exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.493
KJJ38244.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.476
KJJ38314.1
Orotate phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.464
KJJ39287.1
Osmotically inducible protein C; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.448
KJJ39841.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
   0.447
Your Current Organism:
Aequorivita vladivostokensis
NCBI taxonomy Id: 171194
Other names: A. vladivostokensis, Aequorivita vladivostokensis (Nedashkovskaya et al. 2003) Hahnke et al. 2016, JCM 11732, KMM 3516, NBRC 16718, Vitellibacter vladivostokensis, Vitellibacter vladivostokensis Nedashkovskaya et al. 2003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.