Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KJJ39280.1Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (126 aa)    
Predicted Functional Partners:
KJJ38912.1
Type IV secretion protein Rhs; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.927
KJJ38916.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.884
KJJ38914.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.858
KJJ38915.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.853
KJJ38907.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.828
KJJ38908.1
Phage tail sheath protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.828
guaA
GMP synthase; Contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.805
KJJ37280.1
Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.798
KJJ39236.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.764
KJJ37327.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.764
Your Current Organism:
Aequorivita vladivostokensis
NCBI taxonomy Id: 171194
Other names: A. vladivostokensis, Aequorivita vladivostokensis (Nedashkovskaya et al. 2003) Hahnke et al. 2016, JCM 11732, KMM 3516, NBRC 16718, Vitellibacter vladivostokensis, Vitellibacter vladivostokensis Nedashkovskaya et al. 2003
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