Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KJJ39295.1Thiol peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (166 aa)    
Predicted Functional Partners:
KJJ39296.1
Diacylglycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.809
KJJ37456.1
Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.774
KJJ38543.1
Superoxide dismutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.760
KJJ39293.1
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.589
KJJ39292.1
Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.568
KJJ38762.1
Iron-dependent repressor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.543
KJJ39086.1
Signal peptidase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.519
KJJ38580.1
Malonic semialdehyde reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.509
KJJ38143.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.509
KJJ39294.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.494
Your Current Organism:
Aequorivita vladivostokensis
NCBI taxonomy Id: 171194
Other names: A. vladivostokensis, Aequorivita vladivostokensis (Nedashkovskaya et al. 2003) Hahnke et al. 2016, JCM 11732, KMM 3516, NBRC 16718, Vitellibacter vladivostokensis, Vitellibacter vladivostokensis Nedashkovskaya et al. 2003
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