Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
KJJ39298.1Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology. (786 aa)    
Predicted Functional Partners:
KJJ40002.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.916
KJJ40004.1
Cell division protein FtsZ; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.839
KJJ39590.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.830
KJJ40003.1
Cell division protein FtsA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.823
KJJ37664.1
Cell division protein FtsX; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.786
KJJ37494.1
Phosphonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.785
KJJ39999.1
Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.781
KJJ39995.1
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.779
KJJ39475.1
Septum formation initiator; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.773
KJJ39089.1
Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.759
Your Current Organism:
Aequorivita vladivostokensis
NCBI taxonomy Id: 171194
Other names: A. vladivostokensis, Aequorivita vladivostokensis (Nedashkovskaya et al. 2003) Hahnke et al. 2016, JCM 11732, KMM 3516, NBRC 16718, Vitellibacter vladivostokensis, Vitellibacter vladivostokensis Nedashkovskaya et al. 2003
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