Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KJJ39302.1Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (212 aa)    
Predicted Functional Partners:
KJJ39124.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.591
KJJ37625.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.587
KJJ39304.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.577
KJJ39746.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.565
KJJ39028.1
Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.565
KJJ39029.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.565
KJJ39303.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.535
KJJ39301.1
Glutamine--scyllo-inositol aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.533
KJJ40093.1
CMP deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.450
KJJ39512.1
Guanine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.450
Your Current Organism:
Aequorivita vladivostokensis
NCBI taxonomy Id: 171194
Other names: A. vladivostokensis, Aequorivita vladivostokensis (Nedashkovskaya et al. 2003) Hahnke et al. 2016, JCM 11732, KMM 3516, NBRC 16718, Vitellibacter vladivostokensis, Vitellibacter vladivostokensis Nedashkovskaya et al. 2003
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