STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJJ39448.1Deoxyribodipyrimidine photolyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (434 aa)    
Predicted Functional Partners:
KJJ39446.1
Cell division inhibitor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.832
KJJ39447.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.774
KJJ38543.1
Superoxide dismutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.585
KJJ38641.1
rRNA maturation factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.549
KJJ38068.1
3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.549
KJJ37550.1
Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.536
KJJ38077.1
uracil-DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.529
KJJ37549.1
Phytoene dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.509
KJJ39766.1
Translation initiation factor IF-2; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.478
KJJ40032.1
30S ribosomal protein S17; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.478
Your Current Organism:
Aequorivita vladivostokensis
NCBI taxonomy Id: 171194
Other names: A. vladivostokensis, Aequorivita vladivostokensis (Nedashkovskaya et al. 2003) Hahnke et al. 2016, JCM 11732, KMM 3516, NBRC 16718, Vitellibacter vladivostokensis, Vitellibacter vladivostokensis Nedashkovskaya et al. 2003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.