STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJJ39161.12,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (271 aa)    
Predicted Functional Partners:
KJJ39087.1
Dihydrodipicolinate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.982
KJJ39151.1
Aminotransferase class III; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.921
guaA
GMP synthase; Contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.776
KJJ38522.1
Aspartate-semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.774
KJJ37688.1
Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.682
KJJ39546.1
Dihydrodipicolinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.629
KJJ37931.1
Antibiotic resistance protein MarC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.574
KJJ39160.1
Holliday junction resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.567
KJJ38353.1
Methionine aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.535
KJJ39496.1
phenylalanyl-tRNA synthetase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.521
Your Current Organism:
Aequorivita vladivostokensis
NCBI taxonomy Id: 171194
Other names: A. vladivostokensis, Aequorivita vladivostokensis (Nedashkovskaya et al. 2003) Hahnke et al. 2016, JCM 11732, KMM 3516, NBRC 16718, Vitellibacter vladivostokensis, Vitellibacter vladivostokensis Nedashkovskaya et al. 2003
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