STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJJ38564.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (465 aa)    
Predicted Functional Partners:
KJJ38565.1
Multidrug transporter AcrB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.998
KJJ38566.1
Secretion protein HlyD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.997
KJJ39692.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.939
KJJ39049.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.939
KJJ38792.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.924
KJJ39024.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.897
KJJ39797.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.881
KJJ39795.1
RND transporter MFP subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.800
KJJ39367.1
Heat-shock protein HspQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.795
KJJ39691.1
Copper transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.777
Your Current Organism:
Aequorivita vladivostokensis
NCBI taxonomy Id: 171194
Other names: A. vladivostokensis, Aequorivita vladivostokensis (Nedashkovskaya et al. 2003) Hahnke et al. 2016, JCM 11732, KMM 3516, NBRC 16718, Vitellibacter vladivostokensis, Vitellibacter vladivostokensis Nedashkovskaya et al. 2003
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.