STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJJ38617.1Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)    
Predicted Functional Partners:
KJJ38619.1
Peptidase M1; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.755
KJJ37537.1
acetyl-CoA carboxyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.738
KJJ38618.1
Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.735
KJJ38616.1
Cell shape-determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.582
KJJ37520.1
50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.577
KJJ40045.1
30S ribosomal protein S11; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.573
KJJ38085.1
FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.564
KJJ38641.1
rRNA maturation factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.521
KJJ38307.1
Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.502
KJJ39925.1
Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.496
Your Current Organism:
Aequorivita vladivostokensis
NCBI taxonomy Id: 171194
Other names: A. vladivostokensis, Aequorivita vladivostokensis (Nedashkovskaya et al. 2003) Hahnke et al. 2016, JCM 11732, KMM 3516, NBRC 16718, Vitellibacter vladivostokensis, Vitellibacter vladivostokensis Nedashkovskaya et al. 2003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.