Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KJJ38632.1Dihydroneopterin aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (118 aa)    
Predicted Functional Partners:
KJJ39827.1
7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.991
KJJ38304.1
Dihydropteroate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.989
KJJ37998.1
GTP cyclohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.892
KJJ39210.1
GTP cyclohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.881
KJJ37754.1
Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.837
KJJ38085.1
FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.786
KJJ37771.1
Tetrahydrofolate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.753
KJJ38633.1
glutamate--tRNA ligase; Catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.595
KJJ39099.1
Deoxyribonucleotide triphosphate pyrophosphatase; Hydrolyzes non-standard nucleotides such as xanthine and inosine; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.588
KJJ39552.1
Riboflavin biosynthesis protein RibD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.569
Your Current Organism:
Aequorivita vladivostokensis
NCBI taxonomy Id: 171194
Other names: A. vladivostokensis, Aequorivita vladivostokensis (Nedashkovskaya et al. 2003) Hahnke et al. 2016, JCM 11732, KMM 3516, NBRC 16718, Vitellibacter vladivostokensis, Vitellibacter vladivostokensis Nedashkovskaya et al. 2003
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