STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJJ38699.12-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (313 aa)    
Predicted Functional Partners:
KJJ39204.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.976
KJJ38700.1
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.970
KJJ39205.1
3-phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.921
KJJ39520.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.900
KJJ38350.1
Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.897
KJJ39967.1
Homoserine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.797
KJJ39476.1
Uridine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.769
KJJ39778.1
Malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.734
KJJ40037.1
50S ribosomal protein L6; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.734
KJJ38694.1
ATP F0F1 synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.730
Your Current Organism:
Aequorivita vladivostokensis
NCBI taxonomy Id: 171194
Other names: A. vladivostokensis, Aequorivita vladivostokensis (Nedashkovskaya et al. 2003) Hahnke et al. 2016, JCM 11732, KMM 3516, NBRC 16718, Vitellibacter vladivostokensis, Vitellibacter vladivostokensis Nedashkovskaya et al. 2003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.