STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJJ38423.1Perosamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)    
Predicted Functional Partners:
KJJ38834.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.894
KJJ38422.1
GDP-mannose 4,6-dehydratase; Catalyzes the formation of GDP-4-dehydro-6-deoxy-D-mannose from GDP mannose; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.826
KJJ38844.1
UDP-glucose 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.812
KJJ38424.1
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.811
KJJ38652.1
Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.791
KJJ39526.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.786
KJJ38842.1
Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.711
KJJ38204.1
GDP-L-fucose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.670
KJJ38673.1
NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
  0.584
KJJ38841.1
UDP-N-acetylglucosamine 2-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.541
Your Current Organism:
Aequorivita vladivostokensis
NCBI taxonomy Id: 171194
Other names: A. vladivostokensis, Aequorivita vladivostokensis (Nedashkovskaya et al. 2003) Hahnke et al. 2016, JCM 11732, KMM 3516, NBRC 16718, Vitellibacter vladivostokensis, Vitellibacter vladivostokensis Nedashkovskaya et al. 2003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.