Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KJJ38292.1Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (728 aa)    
Predicted Functional Partners:
KJJ40048.1
Carbamoyl phosphate synthase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.853
KJJ37899.1
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.848
KJJ38545.1
Amidophosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.845
KJJ37750.1
Glycine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.845
KJJ40106.1
Glutamate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.842
KJJ38874.1
Gamma-glutamyltranspeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.842
KJJ39781.1
Glycine cleavage system protein H; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.837
KJJ39849.1
Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.837
KJJ39428.1
Carbamoyl phosphate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.837
KJJ38837.1
ATP-dependent carboxylate-amine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.837
Your Current Organism:
Aequorivita vladivostokensis
NCBI taxonomy Id: 171194
Other names: A. vladivostokensis, Aequorivita vladivostokensis (Nedashkovskaya et al. 2003) Hahnke et al. 2016, JCM 11732, KMM 3516, NBRC 16718, Vitellibacter vladivostokensis, Vitellibacter vladivostokensis Nedashkovskaya et al. 2003
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