STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJJ38022.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (77 aa)    
Predicted Functional Partners:
KJJ38621.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.903
KJJ37997.1
cysteine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.810
KJJ37516.1
Preprotein translocase subunit SecE; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.800
KJJ37379.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.767
KJJ37996.1
Diacylglyceryl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.720
KJJ39673.1
seryl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.706
KJJ38310.1
Transcription termination factor Rho; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.677
KJJ38160.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.673
rplB
50S ribosomal protein L2; One of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.634
KJJ40024.1
50S ribosomal protein L4; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.631
Your Current Organism:
Aequorivita vladivostokensis
NCBI taxonomy Id: 171194
Other names: A. vladivostokensis, Aequorivita vladivostokensis (Nedashkovskaya et al. 2003) Hahnke et al. 2016, JCM 11732, KMM 3516, NBRC 16718, Vitellibacter vladivostokensis, Vitellibacter vladivostokensis Nedashkovskaya et al. 2003
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.