STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJJ37603.1Heme A synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (339 aa)    
Predicted Functional Partners:
KJJ40104.1
Protoheme IX farnesyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.992
KJJ39774.1
Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.891
KJJ38923.1
Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.874
KJJ39773.1
Cytochrome C oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.867
KJJ38990.1
Bifunctional cbb3-type cytochrome c oxidase subunit I/II; CcoN/CcoO FixN/FixO; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.826
KJJ39787.1
Cytochrome oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.804
KJJ39786.1
Cytochrome oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.774
KJJ39006.1
Nitric oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.774
KJJ38317.1
Peptidase M41; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.618
KJJ38383.1
Fructose-bisphosphate aldolase; Catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.595
Your Current Organism:
Aequorivita vladivostokensis
NCBI taxonomy Id: 171194
Other names: A. vladivostokensis, Aequorivita vladivostokensis (Nedashkovskaya et al. 2003) Hahnke et al. 2016, JCM 11732, KMM 3516, NBRC 16718, Vitellibacter vladivostokensis, Vitellibacter vladivostokensis Nedashkovskaya et al. 2003
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