STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJJ37456.1Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (182 aa)    
Predicted Functional Partners:
KJJ39295.1
Thiol peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.780
KJJ40022.1
30S ribosomal protein S10; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.744
KJJ39288.1
Superoxide dismutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.716
KJJ40033.1
50S ribosomal protein L14; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.690
KJJ39179.1
Catalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.644
katE
Hydroperoxidase; Catalase HPII; monofunctional catalase that decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.644
KJJ38085.1
FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.643
KJJ40034.1
50S ribosomal protein L5; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.576
KJJ40027.1
30S ribosomal protein S19; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.575
KJJ39069.1
Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.572
Your Current Organism:
Aequorivita vladivostokensis
NCBI taxonomy Id: 171194
Other names: A. vladivostokensis, Aequorivita vladivostokensis (Nedashkovskaya et al. 2003) Hahnke et al. 2016, JCM 11732, KMM 3516, NBRC 16718, Vitellibacter vladivostokensis, Vitellibacter vladivostokensis Nedashkovskaya et al. 2003
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.