STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001902575_00222Unannotated protein. (156 aa)    
Predicted Functional Partners:
GCA_001902575_00223
Unannotated protein.
 
 0.990
GCA_001902575_00361
Unannotated protein.
 
 0.924
GCA_001902575_01035
Unannotated protein.
 
 
 0.817
GCA_001902575_00224
Unannotated protein.
       0.797
GCA_001902575_00451
Unannotated protein.
  
 
 0.753
GCA_001902575_00332
Unannotated protein.
 
  
  0.698
GCA_001902575_00225
Unannotated protein.
  
    0.695
GCA_001902575_00812
Unannotated protein.
    
  0.684
GCA_001902575_00697
Unannotated protein.
    
  0.668
GCA_001902575_00226
Unannotated protein.
       0.577
Your Current Organism:
Streptobacillus notomytis
NCBI taxonomy Id: 1712031
Other names: CCM 8593, CCUG 12425, DSM 100026, EF 12425, S. notomytis, Streptobacillus notomytis Eisenberg et al. 2015, Streptobacillus sp. AHL 370-1, Streptobacillus sp. CCM 8593, Streptobacillus sp. CCUG 12425, Streptobacillus sp. DSM 100026, Streptobacillus sp. EF 12425, Streptobacillus sp. KWG2, Streptobacillus sp. KWG24, strain AHL 370-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.