STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000746025_00003annotation not available (508 aa)    
Predicted Functional Partners:
GCA_000746025_01390
annotation not available
  
     0.736
GCA_000746025_03213
annotation not available
  
    0.708
GCA_000746025_03422
annotation not available
  
    0.635
GCA_000746025_01736
annotation not available
  
     0.624
GCA_000746025_02132
annotation not available
  
    0.607
GCA_000746025_02040
annotation not available
  
     0.592
GCA_000746025_01954
annotation not available
  
     0.562
GCA_000746025_00437
annotation not available
  
     0.561
GCA_000746025_01091
annotation not available
 
  
 0.556
GCA_000746025_01099
annotation not available
 
   
 0.546
Your Current Organism:
Thermoanaerosceptrum fracticalcis
NCBI taxonomy Id: 1712410
Other names: ATCC TSD-12, Clostridiales bacterium DRI-13, DSM 100382, Peptococcaceae bacterium DRI-13, T. fracticalcis, strain DRI-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.