STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000746025_00174annotation not available (75 aa)    
Predicted Functional Partners:
GCA_000746025_00173
annotation not available
 
     0.958
GCA_000746025_03653
annotation not available
   
 
 0.844
GCA_000746025_01603
annotation not available
  
     0.695
GCA_000746025_03079
annotation not available
  
     0.536
GCA_000746025_00166
annotation not available
  
     0.531
GCA_000746025_01474
annotation not available
  
     0.528
GCA_000746025_00932
annotation not available
 
     0.494
GCA_000746025_01472
annotation not available
  
     0.475
GCA_000746025_01475
annotation not available
  
     0.462
GCA_000746025_01473
annotation not available
 
     0.452
Your Current Organism:
Thermoanaerosceptrum fracticalcis
NCBI taxonomy Id: 1712410
Other names: ATCC TSD-12, Clostridiales bacterium DRI-13, DSM 100382, Peptococcaceae bacterium DRI-13, T. fracticalcis, strain DRI-13
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.