STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000746025_00514annotation not available (495 aa)    
Predicted Functional Partners:
GCA_000746025_00515
annotation not available
       0.658
GCA_000746025_00516
annotation not available
       0.658
GCA_000746025_00513
annotation not available
       0.628
GCA_000746025_01665
annotation not available
   
  
 0.610
GCA_000746025_00368
annotation not available
  
    0.499
GCA_000746025_00364
annotation not available
  
  
 0.486
GCA_000746025_00511
annotation not available
       0.485
GCA_000746025_00689
annotation not available
    
  0.469
GCA_000746025_00512
annotation not available
       0.468
GCA_000746025_00510
annotation not available
     
 0.436
Your Current Organism:
Thermoanaerosceptrum fracticalcis
NCBI taxonomy Id: 1712410
Other names: ATCC TSD-12, Clostridiales bacterium DRI-13, DSM 100382, Peptococcaceae bacterium DRI-13, T. fracticalcis, strain DRI-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.