STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000746025_02796annotation not available (434 aa)    
Predicted Functional Partners:
GCA_000746025_03586
annotation not available
  
 0.774
GCA_000746025_01041
annotation not available
 
  
 0.682
GCA_000746025_02852
annotation not available
    
  0.655
GCA_000746025_01038
annotation not available
 
0.644
GCA_000746025_01040
annotation not available
 0.636
GCA_000746025_01601
annotation not available
 
  0.604
GCA_000746025_02099
annotation not available
     
 0.602
GCA_000746025_02797
annotation not available
 
     0.551
GCA_000746025_01042
annotation not available
 0.534
GCA_000746025_02833
annotation not available
 
  0.515
Your Current Organism:
Thermoanaerosceptrum fracticalcis
NCBI taxonomy Id: 1712410
Other names: ATCC TSD-12, Clostridiales bacterium DRI-13, DSM 100382, Peptococcaceae bacterium DRI-13, T. fracticalcis, strain DRI-13
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.