STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUH87274.1Flavinator of succinate dehydrogenase. (89 aa)    
Predicted Functional Partners:
CUH86771.1
Putative FAD-binding dehydrogenase.
  
 0.975
sdhA
Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 0.975
immR
HTH-type transcriptional regulator ImmR.
       0.831
CUH87275.1
Hypothetical protein.
 
     0.799
CUH88528.1
SMI1 / KNR4 family protein.
  
     0.703
CUH87271.1
Hypothetical protein.
       0.695
CUH87272.1
Aspartate aminotransferase.
    
  0.673
sdhC
Succinate dehydrogenase cytochrome b556 subunit.
    
 0.629
sdhB
Succinate dehydrogenase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
 
 0.592
CUH86187.1
Hypothetical protein.
  
     0.582
Your Current Organism:
Phaeobacter sp. CECT5382
NCBI taxonomy Id: 1712645
Other names: P. sp. CECT 5382, Phaeobacter sp. CECT 5382
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