Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ42622.1 | SJZ42642.1 | SAMN02745154_00074 | SAMN02745154_00075 | Dinuclear metal center protein, YbgI/SA1388 family. | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.815 |
SJZ42622.1 | SJZ42801.1 | SAMN02745154_00074 | SAMN02745154_00078 | Dinuclear metal center protein, YbgI/SA1388 family. | Hypothetical protein. | 0.499 |
SJZ42622.1 | dnaG | SAMN02745154_00074 | SAMN02745154_00076 | Dinuclear metal center protein, YbgI/SA1388 family. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.797 |
SJZ42622.1 | glyQS | SAMN02745154_00074 | SAMN02745154_00077 | Dinuclear metal center protein, YbgI/SA1388 family. | glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.788 |
SJZ42642.1 | SJZ42622.1 | SAMN02745154_00075 | SAMN02745154_00074 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Dinuclear metal center protein, YbgI/SA1388 family. | 0.815 |
SJZ42642.1 | SJZ42801.1 | SAMN02745154_00075 | SAMN02745154_00078 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hypothetical protein. | 0.499 |
SJZ42642.1 | dnaG | SAMN02745154_00075 | SAMN02745154_00076 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.992 |
SJZ42642.1 | glyQS | SAMN02745154_00075 | SAMN02745154_00077 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.801 |
SJZ42801.1 | SJZ42622.1 | SAMN02745154_00078 | SAMN02745154_00074 | Hypothetical protein. | Dinuclear metal center protein, YbgI/SA1388 family. | 0.499 |
SJZ42801.1 | SJZ42642.1 | SAMN02745154_00078 | SAMN02745154_00075 | Hypothetical protein. | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.499 |
SJZ42801.1 | dnaG | SAMN02745154_00078 | SAMN02745154_00076 | Hypothetical protein. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.506 |
SJZ42801.1 | glyQS | SAMN02745154_00078 | SAMN02745154_00077 | Hypothetical protein. | glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.536 |
dnaG | SJZ42622.1 | SAMN02745154_00076 | SAMN02745154_00074 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | Dinuclear metal center protein, YbgI/SA1388 family. | 0.797 |
dnaG | SJZ42642.1 | SAMN02745154_00076 | SAMN02745154_00075 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.992 |
dnaG | SJZ42801.1 | SAMN02745154_00076 | SAMN02745154_00078 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | Hypothetical protein. | 0.506 |
dnaG | glyQS | SAMN02745154_00076 | SAMN02745154_00077 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.810 |
glyQS | SJZ42622.1 | SAMN02745154_00077 | SAMN02745154_00074 | glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family. | Dinuclear metal center protein, YbgI/SA1388 family. | 0.788 |
glyQS | SJZ42642.1 | SAMN02745154_00077 | SAMN02745154_00075 | glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family. | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.801 |
glyQS | SJZ42801.1 | SAMN02745154_00077 | SAMN02745154_00078 | glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family. | Hypothetical protein. | 0.536 |
glyQS | dnaG | SAMN02745154_00077 | SAMN02745154_00076 | glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.810 |